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Out of darkness, blind Mexican cavefish illuminate brain evolution

Deep within the dark caves of northeastern Mexico lives a fish that has spent hundreds of thousands of years adapting to a world without light. The blind Mexican cavefish (Astyanax mexicanus) has evolved in perpetual darkness, losing its eyes and pigmentation while developing remarkable adaptations that help it survive in nutrient-poor environments.

Now, scientists are using this extraordinary species to uncover how evolution rewires the brain and shapes behavior. Because Astyanax exists both as sighted surface fish and as more than 30 independently evolved cave populations, researchers can directly compare how life in darkness alters sensory systems, neural circuits and behavior.

With new genetic tools and advanced imaging technologies that allow scientists to watch brain activity in real time, this unique fish is providing unprecedented insights into how animals adapt to extreme environments—and how evolution transforms the brain itself.

Synthetic DNA toolkit expands scientists’ ability to recognize genetic targets

A new method for recognizing and targeting DNA that dramatically expands the range of genetic sequences scientists can identify has been developed by experts at the University of Portsmouth. Published this week in Nature Communications, the research opens new possibilities for gene-targeting technologies, molecular diagnostics and DNA nanotechnology.

Dr. David Rusling, associate professor in bioengineering from the University of Portsmouth’s School of Medicine, Pharmacy and Biomedical Sciences, said, Our lab develops synthetic molecules that can recognize and bind to unique gene sequences. By introducing synthetic DNA bases into these molecules, we’ve been able to significantly improve how they recognize their targets.

I’ve worked in this area for around 20 years, and this is the first time we’ve had a system that combines strong recognition under physiological conditions with building blocks that are commercially available to other researchers.

An AAV variant selected through NHP screens robustly transduces the brain and drives secreted protein expression in NHPs and mice

Tecedor et al. used directed evolution to engineer AAVs with enhanced ependymal and brain delivery after injection into the cerebrospinal fluid. I think it would be interesting to try lumbar puncture delivery of these AAVs as well to see if they maintain decent biodistribution. (See my other post about Hinderer et al.’s paper: https://doi.org/10.1016/j.omtm.2020.04.012).


AAV capsid variants enriched for transduction of ventricular lining cells and brain parenchyma reduce the dose required for gene therapy to the CNS.

Specific cognitive abilities are highly heritable independent of general intelligence

A massive new meta-analysis reveals that individual cognitive abilities, like reading and math, rely on inherited DNA just as much as overall intelligence, suggesting people possess heavily customized genetic cognitive profiles independent of general smarts.

These tiny genetic fragments may be critical for telling a brain when to rest

The altered presence of tiny fragments of neuronal genes, called microexons, causes hyperarousal in zebrafish. This is the main conclusion of an international study led by Pompeu Fabra University (UPF) and the Center for Genomic Regulation (CRG). An abnormal pattern of neural microexon presence leads to a hyperarousal state characterized by heightened neural activity and insomnia, commonly associated with stress but also with neurodevelopmental disorders.

Arousal regulation is highly conserved in evolution. Therefore, this finding could help researchers understand the mechanism underlying some human neurodevelopmental disorders, such as autism and schizophrenia, conditions associated with microexon mutations.

To survive, animals need to be ready to react to external and internal stimuli. This activation of the central nervous system, arousal, is highly conserved throughout the animal kingdom.

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