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Archive for the ‘genetics’ category: Page 166

Sep 12, 2022

Artificial pieces of brain use light to communicate with real neurons

Posted by in categories: biotech/medical, cyborgs, genetics, health, robotics/AI

Researchers have created a way for artificial neuronal networks to communicate with biological neuronal networks. The new system converts artificial electrical spiking signals to a visual pattern than is then used to entrain the real neurons via optogenetic stimulation of the network. This advance will be important for future neuroprosthetic devices that replace damages neurons with artificial neuronal circuitry.

A prosthesis is an artificial device that replaces an injured or missing part of the body. You can easily imagine a stereotypical pirate with a wooden leg or Luke Skywalker’s famous robotic hand. Less dramatically, think of old-school prosthetics like glasses and contact lenses that replace the natural lenses in our eyes. Now try to imagine a prosthesis that replaces part of a damaged brain. What could artificial brain matter be like? How would it even work?

Creating neuroprosthetic technology is the goal of an international team led by by the Ikerbasque Researcher Paolo Bonifazi from Biocruces Health Research Institute (Bilbao, Spain), and Timothée Levi from Institute of Industrial Science, The University of Tokyo and from IMS lab, University of Bordeaux. Although several types of artificial neurons have been developed, none have been truly practical for neuroprostheses. One of the biggest problems is that neurons in the brain communicate very precisely, but electrical output from the typical electrical neural network is unable to target specific neurons. To overcome this problem, the team converted the electrical signals to light. As Levi explains, “advances in optogenetic technology allowed us to precisely target neurons in a very small area of our biological neuronal network.”

Sep 11, 2022

Schizophrenia May Be the Price We Pay for a Big Brain

Posted by in categories: biotech/medical, genetics, neuroscience

Circa 2015 face_with_colon_three


The disease is linked to genetic changes on the evolutionary road from ape to human.

Sep 11, 2022

Deinococcus radiodurans — the consummate survivor

Posted by in categories: biotech/medical, chemistry, genetics

Circa 2005 Bacteria that is resistant to radiation could lead to better radiation resistance in humans.


Relatively little is known about the biochemical basis of the capacity of Deinococcus radiodurans to endure the genetic insult that results from exposure to ionizing radiation and can include hundreds of DNA double-strand breaks. However, recent reports indicate that this species compensates for extensive DNA damage through adaptations that allow cells to avoid the potentially detrimental effects of DNA strand breaks. It seems that D. radiodurans uses mechanisms that limit DNA degradation and that restrict the diffusion of DNA fragments that are produced following irradiation, to preserve genetic integrity. These mechanisms also increase the efficiency of the DNA-repair proteins.

Sep 11, 2022

Scientists Are Working on a Gene-Hacking Drug That Could Treat Baldness

Posted by in categories: biotech/medical, genetics

Using gene modification techniques, a team of researchers have come up with a new treatment for balding, Wired reports — a condition experienced to varying degrees by two-thirds of American men by age 35.

The team, associated with the University of California, Irvine and a biotech company called Amplifica, believes they’ve identified the signaling pathway that drive hair growth to find new ways to stop stem cells from giving up on producing hair follicles.

Experiments with mice, as detailed in a new paper published in the journal Developmental Cell last month, have been promising. The mice were genetically modified to have the hair growth signaling pathway turned on permanently.

Sep 11, 2022

DHEA-S Is A Weakness In My Data: Blood Test #5 in 2022

Posted by in categories: biotech/medical, genetics

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Sep 10, 2022

Scientists Solve Century-Old Supergene Mystery

Posted by in categories: biotech/medical, genetics

Researchers have solved the century-old mystery of a supergene that causes efficient cross-pollination in flowers. The results reveal that sequence length variation at the DNA

DNA, or deoxyribonucleic acid, is a molecule composed of two long strands of nucleotides that coil around each other to form a double helix. It is the hereditary material in humans and almost all other organisms that carries genetic instructions for development, functioning, growth, and reproduction. Nearly every cell in a person’s body has the same DNA. Most DNA is located in the cell nucleus (where it is called nuclear DNA), but a small amount of DNA can also be found in the mitochondria (where it is called mitochondrial DNA or mtDNA).

Sep 8, 2022

Rewriting Our Understanding of Epigenetics: Scientists Reveal We Inherit More Than Previously Thought

Posted by in categories: biotech/medical, genetics

A fundamental discovery concerning a driver of healthy development in embryos might rewrite our understanding of what we can inherit from our parents and how their life experiences shape us. The new study reveals that epigenetic information, which sits on top of DNA

DNA, or deoxyribonucleic acid, is a molecule composed of two long strands of nucleotides that coil around each other to form a double helix. It is the hereditary material in humans and almost all other organisms that carries genetic instructions for development, functioning, growth, and reproduction. Nearly every cell in a person’s body has the same DNA. Most DNA is located in the cell nucleus (where it is called nuclear DNA), but a small amount of DNA can also be found in the mitochondria (where it is called mitochondrial DNA or mtDNA).

Sep 8, 2022

10 Seconds to the Future | Mutation | Free Documentary

Posted by in categories: education, existential risks, genetics, health, nanotechnology, robotics/AI, space travel

2077 — 10 Seconds to the Future — Mutation | Science Documentary.

2077 — 10 Seconds to the Future | Global Estrangement: https://youtu.be/CTOduDIkcdM

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Sep 7, 2022

Prediction of BRCA Gene Mutation in Breast Cancer Based on Deep Learning and Histopathology Images

Posted by in categories: biotech/medical, genetics, robotics/AI

Background: Breast cancer is one of the most common cancers and the leading cause of death from cancer among women worldwide. The genetic predisposition to breast cancer may be associated with a mutation in particular genes such as gene BRCA1/2. Patients who carry a germline pathogenic mutation in BRCA1/2 genes have a significantly increased risk of developing breast cancer and might benefit from targeted therapy. However, genetic testing is time consuming and costly. This study aims to predict the risk of gBRCA mutation by using the whole-slide pathology features of breast cancer H&E stains and the patients’ gBRCA mutation status.

Methods: In this study, we trained a deep convolutional neural network (CNN) of ResNet on whole-slide images (WSIs) to predict the gBRCA mutation in breast cancer. Since the dimensions are too large for slide-based training, we divided WSI into smaller tiles with the original resolution. The tile-based classification was then combined by adding the positive classification result to generate the combined slide-based accuracy. Models were trained based on the annotated tumor location and gBRCA mutation status labeled by a designated breast cancer pathologist. Four models were trained on tiles cropped at 5×, 10×, 20×, and 40× magnification, assuming that low magnification and high magnification may provide different levels of information for classification.

Results: A trained model was validated through an external dataset that contains 17 mutants and 47 wilds. In the external validation dataset, AUCs (95% CI) of DL models that used 40×, 20×, 10×, and 5× magnification tiles among all cases were 0.766 (0.763–0.769), 0.763 (0.758–0.769), 0.750 (0.738–0.761), and 0.551 (0.526–0.575), respectively, while the corresponding magnification slides among all cases were 0.774 (0.642–0.905), 0.804 (0.676–0.931), 0.828 (0.691–0.966), and 0.635 (0.471–0.798), respectively. The study also identified the influence of histological grade to the accuracy of the prediction.

Sep 7, 2022

“Brand New Paradigm” — Scientists Discover How Human Eggs Remain Healthy for Decades

Posted by in categories: biotech/medical, genetics, nuclear energy

According to research from the Center for Genomic Regulation (CRG) published in the journal Nature, immature human egg cells bypass a critical metabolic process believed to be necessary for producing energy.

The cells modify their metabolism to stop producing reactive oxygen species, dangerous molecules that can accumulate, damage DNA

DNA, or deoxyribonucleic acid, is a molecule composed of two long strands of nucleotides that coil around each other to form a double helix. It is the hereditary material in humans and almost all other organisms that carries genetic instructions for development, functioning, growth, and reproduction. Nearly every cell in a person’s body has the same DNA. Most DNA is located in the cell nucleus (where it is called nuclear DNA), but a small amount of DNA can also be found in the mitochondria (where it is called mitochondrial DNA or mtDNA).