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Archive for the ‘genetics’ category: Page 174

Aug 24, 2021

CRISPR pinpoints new leukemia target and a ‘pocket’ that could make it druggable

Posted by in categories: biotech/medical, genetics

A team at Penn’s medical school discovered that an epigenetic regulatory protein called ZMYND8 governs the expression of genes that are critical for the growth and survival of AML cells. Inhibiting ZMYND8 in mouse models shrank tumors. The researchers also found a biomarker that they believe could predict which patients are likely to respond to ZMYND8 inhibition, they reported in the journal Molecular Cell.

AML is one of the hardest leukemias to treat, with a five-year survival rate of about 27% in adults. The Penn team had been searching for precision medicine approaches that could improve the prognosis for adults with AML, and they turned to CRISPR for help.

ZMYND8 is known as a “histone reader” in cancer that can recognize epigenetic changes and influence gene expression involved in metastasis.

Aug 24, 2021

The Rise of Man: What Was Our Ultimate Success Formula As a Species?

Posted by in categories: bioengineering, biotech/medical, evolution, food, genetics, internet

What we’ll soon see is the ultimate self-directed evolution fueled forward by gene editing, genetic engineering, reproduction assisted technology, neuro-engineering, mind uploading and creation of artificial life. Our success as a technological species essentially created what might be called our species-specific “success formula.” We devised tools and instruments, created new methodologies and processes, and readjusted ecological niches to suit our needs. And our technology shaped us back by shaping our minds. In a very real sense, we have co-evolved with our technology. As an animal species among many other species competing for survival, this was our unique passage to success.

#TECHNOCULTURE : #TheRiseofMan #CyberneticTheoryofMind

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Aug 23, 2021

Mahabbah: I am pleased to announce that my science fiction story “Mahabbah” has been published by After Dinner Conversation

Posted by in categories: biotech/medical, ethics, genetics, neuroscience

My story centers on the concept of a genetically modified virus (named) which infects the brain and gives people enhanced empathy. The narrative takes place in a fictional middle eastern city called Fakhoury and explores bioethical themes. Love acts as a central motif which ties the story together. Note that this piece will be available online for a limited time, after which you will need to pay for the magazine. I encourage you to check out my story!


Read Philosophy Ethics Short Stories with your friends, family, book club, and students. Each story comes with suggested discussion questions.

Aug 23, 2021

Sudden Death From Deep in the Brain?

Posted by in categories: biotech/medical, genetics, neuroscience

Dravet syndrome (DS) is a developmental and epileptic encephalopathy with an increased incidence of sudden death. Evidence of interictal breathing deficits in DS suggests that alterations in subcortical projections to brainstem nuclei may exist, which might be driving comorbidities in DS.


Summary: Researchers have identified a circuit within the brain that may be responsible for respiratory dysfunction and sudden death associated with Dravet syndrome.

Source: Vanderbilt University

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Aug 20, 2021

New clue to human evolution’s biggest mystery emerges in Philippines

Posted by in categories: biotech/medical, evolution, genetics, sex

Denisovan DNA lives on in some humans today because, once our Homo sapien ancestors encountered the Denisovans, they had sex with them and gave birth to babies — something geneticists call admixture. By analyzing current-day genetic data, we can look back into human history.


Geneticists have found that a Philippine ethnic group known as the Ayta Magbukon has the highest level of Denisovan ancestry in the world.

Aug 20, 2021

Synthetic Biology Approaches for Engineering Next-Generation Adenoviral Gene Therapies

Posted by in categories: bioengineering, biotech/medical, chemistry, genetics, nanotechnology, neuroscience

I am pleased to announce that my lead-author review paper has been published in ACS Nano! If you are interested in learning about the convergence of synthetic biology and adenoviral gene therapy, I encourage you to check out my paper.

If you cannot access the full text, I have also posted a local copy at the following link: https://logancollinsblog.files.wordpress.com/2021/08/synthet…s-2021.pdf.

#ACS #ACSNano #SyntheticBiology #GeneTherapy #Biology #Biotech #Science #Biotechnology #Nanotechnology #Adenovirus #Engineering #Virology

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Aug 20, 2021

Microengineered perfusable 3D-bioprinted glioblastoma model for in vivo mimicry of tumor microenvironment

Posted by in categories: bioengineering, biotech/medical, genetics, neuroscience

Many drugs show promising results in laboratory research but eventually fail clinical trials. We hypothesize that one main reason for this translational gap is that current cancer models are inadequate. Most models lack the tumor-stroma interactions, which are essential for proper representation of cancer complexed biology. Therefore, we recapitulated the tumor heterogenic microenvironment by creating fibrin glioblastoma bioink consisting of patient-derived glioblastoma cells, astrocytes, and microglia. In addition, perfusable blood vessels were created using a sacrificial bioink coated with brain pericytes and endothelial cells. We observed similar growth curves, drug response, and genetic signature of glioblastoma cells grown in our 3D-bioink platform and in orthotopic cancer mouse models as opposed to 2D culture on rigid plastic plates. Our 3D-bioprinted model could be the basis for potentially replacing cell cultures and animal models as a powerful platform for rapid, reproducible, and robust target discovery; personalized therapy screening; and drug development.

Cancer is the second leading cause of death globally. It is estimated that around 30 to 40% of patients with cancer are being treated with ineffective drugs ; therefore, preclinical drug screening platforms attempt to overcome this challenge. Several approaches, such as whole-exome or RNA sequencing (RNA-seq), aim to identify druggable, known mutations or overexpressed genes that may be exploited as a therapeutic target for personalized therapy. More advanced approaches offer to assess the efficacy of a drug or combinations of drugs in patient-derived tumor xenograft models or in vitro three-dimensional (3D) organoids. Unfortunately, most of the existing methods face unmet challenges, which limit their efficacy. For instance, cells can become quiescent or acquire somatic mutations while growing many generations on plastic under the influence of static mechanical forces and in the absence of functional vasculature.

Aug 20, 2021

CRISPR pioneer Feng Zhang’s latest work delivers mRNA, gene therapy with a human protein

Posted by in categories: biotech/medical, genetics, nanotechnology

COVID-19 mRNA vaccines and existing gene therapies, including those built with the CRISPR-Cas9 gene-editing tool, are delivered into cells with viral vectors or lipid nanoparticles. A research team led by CRISPR pioneer Feng Zhang, Ph.D., of the Broad Institute has developed a new mRNA delivery system that harnesses a human protein.

The system, dubbed SEND, leverages the ability of a human protein called PEG10 to bind to its own mRNA and form a protective capsule around it. In a new study published in Science, Zhang and colleagues engineered PEG10 to take on RNA cargoes of their choice and successfully delivered the system to mouse and human cells.

The findings support SEND as an efficient delivery platform for RNA-based gene therapies that can be repeatedly dosed, the researchers suggested. Because SEND uses a protein that’s produced naturally in the body, it may not trigger immune responses that can render gene therapies ineffective, the team said.

Aug 20, 2021

A parent’s genes can influence a child’s educational success, inherited or not

Posted by in categories: education, genetics

This study illustrates how complex the relationship between genes and the environment is. Although our study uses genetic methods, it provides strong evidence that, as well as genetics, the environment really matters when we talk about education.


A child’s educational success depends on the genes that they haven’t inherited from their parents, as well as the genes they have, according to a new study led by UCL researchers.

Funded by the Nuffield Foundation, the study confirms that genes a person inherits directly are most likely to contribute to their achievements in education. But parent genes that aren’t directly inherited, yet have still shaped ’ own education levels and subsequently influenced the lifestyle and family environment they provide for their children, are also important and can affect how well a person does at school and beyond.

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Aug 18, 2021

Beware the ‘molecular parasites’ involved in aging and disease

Posted by in categories: biotech/medical, genetics, life extension

If you’ve ever seen a petunia with artfully variegated petals, then you’ve seen transposons at work. The flower’s showy color patterns are due to transposable elements, or DNA sequences that can move locations within a genome. Yet when it comes to transposons’ effects on humans, the results might not be as lovely or desirable.

As researchers learn more about these so-called mobile genetic elements, they’ve found increasing evidence that transposons influence and even promote aging and like cancer as well as neurogenerative and autoimmune disorders, says John Sedivy, a professor of biology and director of the Center on the Biology of Aging at Brown. Sedivy is the corresponding author of a new review article in Nature that discusses the latest thinking and research around transposons.

“Let’s put it this way: These things can be pretty dangerous,” said Sedivy. “If they are uncontrolled, and there are many examples of that, transposons can have profound consequences on most forms of life that we know of.”