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Broth Optical DensityBased Assessment for Phage Therapy: Turbidity Reduction, Antibacterial Virulence, and TimeKill

Phage therapy is the use of bacterial viruses, or bacteriophages, as antibacterial agents. It has been in use for over 100 years and is becoming increasingly common clinically. The first steps of phage therapy include identification of bacteria to be targeted and then obtaining phages with appropriate host ranges. This is followed by various approaches to in vitro phage characterization. Increasingly common for phage phenotypic characterization is the use of kinetic microtiter plate readers. They can both decrease workloads and increase throughput, especially relative to analyses that require plating on agar-based media. These colorimetric/turbidimetric/optical density approaches primarily assess phage-induced culture-wide bacterial lysis, in the shorter term, or instead the phage potential to suppress phage-resistance evolution over longer time frames. Considered here are methods relevant to phage characterization especially for phage-therapy purposes. Discussed are turbidity-reduction assays, determinations of phage antibacterial virulence, and related time-kill curve analysis. All are or can be optical density-based approaches to assessing phage-based bacterial reduction. Emphasis is placed on consideration of the utilities, limitations, and intersections of these similar methods. Emphasized is that the start of “Deviation”—where phage-treated culture turbidity diverges from phage-free controls—may represent a superior endpoint for such optical density-based bacterial-reduction protocols.

A cooperative approach to reproductive success

Fertilization is often imagined as a frantic race, with millions of sperm competing for a single prize. But new research by a team of evolutionary biologists from Syracuse University, the University of Siena in Italy and the University of Szeged in Hungary reveals a more surprising reality, where success can depend less on competition and more on cooperation.

The group focused its study on organisms called arthropods, a large and diverse part of the animal kingdom that includes spiders, crabs, insects and centipedes. The scientists explored instances throughout evolutionary history where arthropod sperm worked together in coordinated groups, forming structures to improve their chances of reaching and fertilizing an egg. This process, known as sperm conjugation, is reshaping what researchers thought they understood about reproduction and evolution.

Ancient Protein AIDS in Anti-Cancer Immunity

Scientists have advanced the field of cancer treatment by leveraging the body’s immune system to recognize and target tumors. The study of the immune system helps better advance these treatments and boost immune responses. The evolution of immune cells and different aspects of the immune system has helped fight aggressive forms of disease. More importantly, as ancient populations become exposed to different diseases over time, heredity can protect future generations from these specific viruses and bacteria.

One specific part of the immune system, known as ‘complement’, is crucial to aiding a robust immune response. Complement is part of the innate immune system and consists of over 50 plasma proteins. Complement proteins rapidly target foreign pathogens and trigger inflammation from infection. Specifically, these proteins help puncture infected cell membranes to eliminate disease. While complement is a unified system, it takes several pathways to function: Classical, Lectin, and Alternative. These three functions trigger complement in different ways but converge into a single innate immune defense. There are also different types of complement proteins. One of the most abundant is complement C3, which acts as a critical surveyor and defense against pathogens. Compliment C3 is an ancient protein and is found in organisms such as jellyfish, playing a pivotal role in the immune system. It specifically tags infected cells with molecules for immune cells to identify and target.

70millionyearold mammal fossil discovered in Mongolia rewrites the story of early mammal evolution

The fossil record has a habit of reshaping ideas that once seemed settled. In the Late Cretaceous, long before the extinction of the dinosaurs, small mammals occupied a world dominated by much larger reptiles.

Moon’s thick crust could amplify elusive gravitational-wave signals

Gravitational waves are tiny ripples in the fabric of spacetime that are produced when massive objects in the cosmos accelerate or collide. By detecting these waves, astrophysicists can study various cosmic events, including black hole mergers, neutron star collisions and the early evolution of the universe.

There are several gravitational-wave observatories in different geographic regions worldwide. While these detectors are highly sensitive to the tiny changes associated with ripples in spacetime, they cannot yet detect waves across all frequency ranges.

Researchers at the Chinese Academy of Sciences and Peking University recently revisited the possibility of using the moon to amplify gravitational waves with frequencies between 0.01 and 1 hertz (Hz), a range that remains largely inaccessible to current gravitational-wave detectors.

The global biogeography of passerine songs

Although bird songs are classic models for understanding the evolution of vocal communication, their global diversity has long made the development of a unifying framework challenging. By analyzing the acoustic architecture of songs from more than 3,000 passerine species worldwide, we show that this acoustic space can be structured around eight elemental motifs. The differential use of these motifs is driven by a combination of species’ biological traits (social organization, morphology, and mating system) and the physics of sound propagation. In tropical rainforests, environmental filtering for transmission efficiency favors structurally simple motifs, such as flat whistles.

JWST captures rare glimpse of early black hole growing inside network of young galaxies

Astronomers using the James Webb Space Telescope have captured one of the clearest views yet of how an early supermassive black hole may grow within a network of young galaxies. The compact active galaxy, seen just a billion years after the Big Bang, lies beside a 12,000-parsec-long filament containing multiple galaxies that are expected to merge within a few hundred million years.

The findings, posted to the arXiv preprint server on July 6, suggest astronomers may be witnessing a short-lived phase in the evolution of rapidly growing black holes while also shedding light on how the first massive galaxies assembled in the early universe.

Northwestern University Researchers Demonstrate Quantum Entanglement Over Busy Telecom Fiber

Kumar and his team measured entanglement fidelity above 94%, confirming it survived the journey at a level impossible for a classical communications system to reproduce.

The study is a part of a broader shift toward integrating quantum technologies with existing telecommunications systems. Kumar and coauthor Jordan Thomas recently explored that evolution in a feature article for Optics & Photonics News.

Next, the team plans to perform quantum teleportation between remote nodes across a real-world telecommunications network. While Kumar has already performed teleportation in his lab, he wants to demonstrate it over a metropolitan fiber carrying commercial traffic.

Astronomers Find Escaping Helium on Rocky World LHS 1140 b

By detecting helium escaping into space, astronomers have found the first direct evidence of an atmosphere on LHS 1,140 b, a rocky exoplanet located in its star’s habitable zone.


A collaborative team of researchers recently announced the discovery of an atmosphere on a rocky exoplanet orbiting in the habitable zone of its star. While this finding is intriguing for the search for life beyond Earth, the atmosphere is not only comprised of helium, but it was found to be escaping the exoplanet. The researchers discuss these findings in a recent study published in the journal Science and it holds the potential to help scientists better understand the formation and evolution of rocky exoplanets while narrowing the search for life beyond Earth.

For the study, the researchers analyzed data about LHS 1,140 b, which orbits a red dwarf star about 50 light-years from Earth and has a radius and mass about 1.7 and 5.6 of Earth, respectively, designating LHS 1,140 b as a super-Earth. While the researchers note this is the first time an atmosphere has been detected around a rocky exoplanet orbiting in the habitable zone of its star, LHS 1,140 b’s atmosphere is primarily comprised of helium and was also found to be escaping the exoplanet or being stripped away.

This is because red dwarf stars have been found to be significantly more active than Sun-like stars, meaning its intense radiation is potentially stripping LHS 1,140 b’s upper atmosphere where the helium is found. Despite this, the team noted other types of gases could be present in the lower altitudes of the atmosphere.

Nature Ecology & Evolution divergence

Yellow-eyed penguins, also known as hoiho or takaraka (Megadyptes antipodes, pictured), are an endangered species endemic to Aotearoa (New Zealand) with only around 3,000 individuals left in the wild, and the only living member of the genus Megadyptes. In collaboration with Ngāi Tahu iwi (tribe) of the South Island of Aotearoa, whole-genome sequencing of 249 individuals that span the entire species range has identified 3 phylogenetically distinct lineages, which suggests that they exist as 3 subspecies that have been isolated from each other for several thousand years. Genome scans also reveal candidate gene variants associated with differential susceptibility to neonatal respiratory distress syndrome.

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