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Sudden Death From Deep in the Brain?

Dravet syndrome (DS) is a developmental and epileptic encephalopathy with an increased incidence of sudden death. Evidence of interictal breathing deficits in DS suggests that alterations in subcortical projections to brainstem nuclei may exist, which might be driving comorbidities in DS.


Summary: Researchers have identified a circuit within the brain that may be responsible for respiratory dysfunction and sudden death associated with Dravet syndrome.

Source: Vanderbilt University

Risk of sudden unexpected death in epilepsy (SUDEP) is among comorbidities present in Dravet Syndrome (DS), a rare, catastrophic form of epilepsy in which seizures begin in infancy, with most cases due to mutations in a single gene, SCN1A.

Breathing issues have been reported in patients and in mouse models of DS, and a recent study implicated respiratory decline in SUDEP in DS mice.

Earbuds That Read Your Mind

Summary: Retrofitting wireless earbuds to detect neural signals and relaying the data back to smartphones via Bluetooth, researchers say the new earEEG system could have multiple applications, including health monitoring.

Source: UC Berkeley.

From keypads to touch screens to voice commands – step by step, the interface between users and their smartphones has become more personalized, more seamless. Now the ultimate personalized interface is approaching: issuing smartphone commands with your brain waves.

Northwestern scientists discover remarkable longevity in a subset of mitochondrial proteins

Northwestern Medicine investigators have discovered that a subset of proteins in mitochondria of brain and heart cells are long-lived, supporting the long-term stability of mitochondrial complex architecture.

The study, published in the Journal of Cell Biology, was led by Jeffrey Savas, PhD, assistant professor in the Ken & Ruth Davee Department of Neurology’s Division of Behavioral Neurology, of Medicine the in Division of Nephrology and Hypertension, and of Pharmacology.

Previous work led by Savas discovered that nuclear pore complex proteins in post-mitotic neurons are exceptionally long-lived and persist for months in mouse and rat brains. These proteins, termed long-lived proteins, or LLPs, provide long-term stability and structure to the nuclear pore and subsequently to the nuclear envelope of neurons; however, this concept had never been considered for other intracellular organelles, until now.

DARPA Announces Research Teams to Develop Intelligent Event-Based Imagers

FENCE program selects researchers to develop low-power, low-latency neuromorphic camera technologies to enable future military applications.


DARPA today announced that three teams of researchers led by Raytheon, BAE Systems, and Northrop Grumman have been selected to develop event-based infrared (IR) camera technologies under the Fast Event-based Neuromorphic Camera and Electronics (FENCE) program. Event-based – or neuromorphic – cameras are an emerging class of sensors with demonstrated advantages relative to traditional imagers. These advanced models operate asynchronously and only transmit information about pixels that have changed. This means they produce significantly less data and operate with much lower latency and power.

“Neuromorphic refers to silicon circuits that mimic brain operation; they offer sparse output, low latency, and high energy efficiency,” said Dr. Whitney Mason, the program manager leading the FENCE program. “Event-based cameras operate under these same principles when dealing with sparse scenes, but currently lack advanced ‘intelligence’ to perform more difficult perception and control tasks.”

Today’s state-of-the-art (SOTA) cameras work well with scenes that have few changes to track and the imagery is relatively simple. Take, for example, a scene of a plane moving through a clear blue sky. SOTA imagers could easily track the movement of the plane. Their capabilities fail, however, in highly cluttered and dynamic scenes, limiting their use among many military applications.

Complex Trauma Linked to Cognitive Impairments and Mental Health Disorders

Summary: Young people who experienced complex early life trauma as a result of interpersonal violence or child abuse had more severe mental health problems and cognitive impairments than their peers with no exposure to trauma.

Source: King’s College London.

New research from King’s has explored whether different types of trauma confer the same risk of future mental illness, in the first study of its kind.

Neural Network Models of the Future – The Key to Unlocking How Our Brain Works

Summary: Researchers discuss different current neural network models and consider the steps that need to be taken to make them more realistic, and thus more useful, as possible.

Source: University of Plymouth.

Neuroscience is a field most obviously associated with medicine and/or psychology. However, my background in physics and computer science enables me to explore, and further understand, how the brain computes and stores information, identifying the underlying physical mechanisms and the interplay between them.

Synthetic Biology Approaches for Engineering Next-Generation Adenoviral Gene Therapies

I am pleased to announce that my lead-author review paper has been published in ACS Nano! If you are interested in learning about the convergence of synthetic biology and adenoviral gene therapy, I encourage you to check out my paper.

If you cannot access the full text, I have also posted a local copy at the following link: https://logancollinsblog.files.wordpress.com/2021/08/synthet…s-2021.pdf.

#ACS #ACSNano #SyntheticBiology #GeneTherapy #Biology #Biotech #Science #Biotechnology #Nanotechnology #Adenovirus #Engineering #Virology


Synthetic biology centers on the design and modular assembly of biological parts so as to construct artificial biological systems. Over the past decade, synthetic biology has blossomed into a highly productive field, yielding advances in diverse areas such as neuroscience, cell-based therapies, and chemical manufacturing. Similarly, the field of gene therapy has made enormous strides both in proof-of-concept studies and in the clinical setting. One viral vector of increasing interest for gene therapy is the adenovirus (Ad). A major part of the Ad’s increasing momentum comes from synthetic biology approaches to Ad engineering. Convergence of gene therapy and synthetic biology has enhanced Ad vectors by mitigating Ad toxicity in vivo, providing precise Ad tropisms, and incorporating genetic circuits to make smart therapies which adapt to environmental stimuli. Synthetic biology engineering of Ad vectors may lead to superior gene delivery and editing platforms which could find applications in a wide range of therapeutic contexts.

Microengineered perfusable 3D-bioprinted glioblastoma model for in vivo mimicry of tumor microenvironment

Many drugs show promising results in laboratory research but eventually fail clinical trials. We hypothesize that one main reason for this translational gap is that current cancer models are inadequate. Most models lack the tumor-stroma interactions, which are essential for proper representation of cancer complexed biology. Therefore, we recapitulated the tumor heterogenic microenvironment by creating fibrin glioblastoma bioink consisting of patient-derived glioblastoma cells, astrocytes, and microglia. In addition, perfusable blood vessels were created using a sacrificial bioink coated with brain pericytes and endothelial cells. We observed similar growth curves, drug response, and genetic signature of glioblastoma cells grown in our 3D-bioink platform and in orthotopic cancer mouse models as opposed to 2D culture on rigid plastic plates. Our 3D-bioprinted model could be the basis for potentially replacing cell cultures and animal models as a powerful platform for rapid, reproducible, and robust target discovery; personalized therapy screening; and drug development.

Cancer is the second leading cause of death globally. It is estimated that around 30 to 40% of patients with cancer are being treated with ineffective drugs ; therefore, preclinical drug screening platforms attempt to overcome this challenge. Several approaches, such as whole-exome or RNA sequencing (RNA-seq), aim to identify druggable, known mutations or overexpressed genes that may be exploited as a therapeutic target for personalized therapy. More advanced approaches offer to assess the efficacy of a drug or combinations of drugs in patient-derived tumor xenograft models or in vitro three-dimensional (3D) organoids. Unfortunately, most of the existing methods face unmet challenges, which limit their efficacy. For instance, cells can become quiescent or acquire somatic mutations while growing many generations on plastic under the influence of static mechanical forces and in the absence of functional vasculature.

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