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Scientists just cracked the code to editing entire chromosomes flawlessly

A group of Chinese scientists has created powerful new tools that allow them to edit large chunks of DNA with incredible accuracy—and without leaving any trace. Using a mix of advanced protein design, AI, and clever genetic tweaks, they’ve overcome major limitations in older gene editing methods. These tools can flip, remove, or insert massive pieces of genetic code in both plants and animals. To prove it works, they engineered rice that’s resistant to herbicides by flipping a huge section of its DNA—something that was nearly impossible before.

Scientists develop microscopic ‘swimming’ discs that could help clean polluted waters: ‘Pave the way for applications’

A team of researchers has created small swimmers that can harvest energy from their surroundings and convert it into movement. The discs, about twice as wide as a human hair, are amazingly partly made from dried food dye, according to a news release from New York University.

The fascinating project includes experts from Harvard, the University of Chicago, and elsewhere.

“The essential new principles we discovered — how to make microscopic objects swim on command using simple materials that undergo phase transitions when exposed to controllable energy sources — pave the way for applications that range from design of responsive fluids, controlled drug delivery, and new classes of sensors, to name a few,” lead researcher Juan de Pablo, from NYU, said in the summary.

Scientists Use Engineered Cells to Combat Aging in Primates

As we age, our bodies gradually lose their ability to repair and regenerate. Stem cells diminish, making it increasingly difficult for tissues to heal and maintain balance. This reduction in stem cells is a hallmark of aging and a key driver of age-related diseases. Scientists have long debated whether this decline is the root cause of aging or a side effect. Efforts to use stem cell transplants to reverse aging have faced many challenges, such as ensuring the cells survive and integrate into the body without causing serious side effects, like tumors.

In a recent study published in Cell, researchers from the Chinese Academy of Sciences and Capital Medical University introduced a new type of human stem cell called senescence-resistant mesenchymal progenitor cells (SRCs) by reprogramming the genetic pathways associated with longevity. These cells, which resist aging and stress without developing tumors, were tested on elderly crab-eating macaques, which share physiological similarities with humans in their 60s and 70s.

The research team conducted a 44-week experiment on these macaques. The macaques received biweekly intravenous injections of SRCs, with a dosage of 2×106 cells per kilogram of body weight. The researchers found no adverse effects among the macaques. Detailed assessments confirmed that the transplanted cells did not cause tissue damage or tumors.

The researchers discovered that SRCs triggered a multi-system rejuvenation, reversing key markers of aging across 10 major physiological systems and 61 different tissue types. The treated macaques exhibited improved cognitive function, and tissue analyses indicated a reduction in age-related degenerative conditions such as brain atrophy, osteoporosis, fibrosis, and lipid buildup. 👍

A thermodynamic approach to machine learning: How optimal transport theory can improve generative models

Joint research led by Sosuke Ito of the University of Tokyo has shown that nonequilibrium thermodynamics, a branch of physics that deals with constantly changing systems, explains why optimal transport theory, a mathematical framework for the optimal change of distribution to reduce cost, makes generative models optimal. As nonequilibrium thermodynamics has yet to be fully leveraged in designing generative models, the discovery offers a novel thermodynamic approach to machine learning research. The findings were published in the journal Physical Review X.

Image generation has been improving in leaps and bounds over recent years: a video of a celebrity eating a bowl of spaghetti that represented the state of the art a couple of years ago would not even qualify as good today. The algorithms that power image generation are called diffusion models, and they contain randomness called “noise.”

During the training process, noise is introduced to the original data through diffusion dynamics. During the generation process, the model must eliminate the noise to generate new content from the noisy data. This is achieved by considering the time-reversed dynamics, as if playing the video in reverse. One piece of the art and science of building a model that produces high-quality content is specifying when and how much noise is added to the data.

Discovery of bumblebee medicine’s simple structure makes synthetic production viable

Researchers at the University of Chemistry and Technology, Prague have successfully developed a method to chemically synthesize callunene, a natural compound that protects bumblebees from a deadly gut parasite. In a recent discovery, the team also determined that the naturally occurring compound is a 50/50 mixture of its mirror-image forms, meaning the synthetic version can be used directly to safeguard vital pollinator colonies.

The study, published in the Journal of Natural Products, addresses the threat posed by the parasite Crithidia bombi. This protozoan infects bumblebees, impairing their ability to find nectar-rich flowers, which ultimately leads to starvation, reduced fitness, and death. The problem is especially acute in commercial indoor farming operations that rely on healthy pollinator colonies. Not only because of the farming effectiveness, but also because parasites might be spread from indoor pollinators to wild colonies.

Nature provides a defense in the form of callunene, a compound found in the nectar of heather (Calluna vulgaris). Bumblebees that forage on heather are prophylactically protected from Crithidia infection. However, the loss of heathland habitats and the difficulty of isolating the compound from natural sources have made this solution impractical on a large scale.

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