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Scientists map DNA folding at single base-pair resolution in living cells

Scientists from Oxford’s Radcliffe Department of Medicine have achieved the most detailed view yet of how DNA folds and functions inside living cells, revealing the physical structures that control when and how genes are switched on.

Using a new technique called MCC ultra, the team mapped the down to a single base pair, unlocking how genes are controlled, or, how the body decides which genes to turn on or off at the right time, in the right cells. This breakthrough gives scientists a powerful new way to understand how lead to disease and opens up fresh routes for drug discovery.

“For the first time, we can see how the genome’s control switches are physically arranged inside cells, said Professor James Davies, lead author of the study published in the journal Cell titled ” Mapping chromatin structure at base-pair resolution unveils a unified model of cis-regulatory element interactions.”

AI-designed antibodies created from scratch

Research led by the University of Washington reports on an AI-guided method that designs epitope-specific antibodies and confirms atomically precise binding using high-resolution molecular imaging, then strengthens those designs so the antibodies latch on much more tightly.

Antibodies dominate modern therapeutics, with more than 160 products on the market and a projected value of US$445 billion in 5 years. Antibodies protect the body by locking onto a precise spot—an epitope—on a virus or toxin.

That pinpoint connection determines whether an antibody blocks infection, marks a pathogen for removal, or neutralizes a harmful protein. When a drug antibody misses its intended epitope, treatment can lose power or trigger side effects by binding the wrong target.

Textbook view of NMDA receptor calcium signals upended by new findings

Drugs that act on NMDA (N-methyl-D-aspartate) receptors, which are essential for learning, memory and moment-by-moment consciousness, are key for treating neuropsychiatric disorders. These drugs were developed based on the assumption that the proportion of calcium in the current produced by these receptors remains constant. That assumption turns out to be false, according to University at Buffalo research published last month in the Proceedings of the National Academy of Sciences.

“Our research reveals that small variations in the brain environment in which NMDA receptors operate can increase or decrease the amount of in the currents fluxed by these receptors,” explains Gabriela K. Popescu, Ph.D., corresponding author and professor of biochemistry in the Jacobs School of Medicine and Biomedical Sciences at UB. “This, in turn, could mean the difference between normal and impaired learning, memory and cognition, symptoms that accompany many neuropsychiatric conditions.”

Quantum ‘pinball’ state of matter in electrons allows both conducting and insulating properties, physicists discover

Electricity powers our lives, including our cars, phones, computers, and more, through the movement of electrons within a circuit. While we can’t see these electrons, electric currents moving through a conductor flow like water through a pipe to produce electricity.

Certain materials, however, allow that electron flow to “freeze” into crystallized shapes, triggering a transition in the state of matter that the electrons collectively form. This turns the material from a conductor to an insulator, stopping the flow of electrons and providing a unique window into their complex behavior. This phenomenon makes possible new technologies in quantum computing, advanced superconductivity for energy and medical imaging, lighting, and highly precise atomic clocks.

A team of Florida State University-based physicists, including National High Magnetic Field Laboratory Dirac Postdoctoral Fellow Aman Kumar, Associate Professor Hitesh Changlani and Assistant Professor Cyprian Lewandowski, have shown the conditions necessary to stabilize a phase of matter in which electrons exist in a solid crystalline lattice but can “melt” into a , known as a generalized Wigner crystal. Their work was published in npj Quantum Materials.

Physicists observe key evidence of unconventional superconductivity in magic-angle graphene

Superconductors are like the express trains in a metro system. Any electricity that “boards” a superconducting material can zip through it without stopping and losing energy along the way. As such, superconductors are extremely energy efficient, and are used today to power a variety of applications, from MRI machines to particle accelerators.

But these “conventional” superconductors are somewhat limited in terms of uses because they must be brought down to ultra-low temperatures using elaborate cooling systems to keep them in their superconducting state.

If superconductors could work at higher, room-like temperatures, however, they would enable a new world of technologies, from zero-energy-loss power cables and electricity grids, to practical quantum computing systems. And so, scientists at MIT and elsewhere are studying “unconventional” superconductors—materials that exhibit in ways that are different from and potentially more promising than today’s superconductors.

A new patch could help to heal the heart

MIT engineers have developed a flexible drug-delivery patch that can be placed on the heart after a heart attack to help promote healing and regeneration of cardiac tissue.

The new patch is designed to carry several different drugs that can be released at different times, on a pre-programmed schedule. In a study of rats, the researchers showed that this treatment reduced the amount of damaged heart tissue by 50 percent and significantly improved cardiac function.

If approved for use in humans, this type of patch could help heart attack victims recover more of their cardiac function than is now possible, the researchers say.

Common Sweetener Could Damage Critical Brain Barrier, Risking Stroke

Found in everything from protein bars to energy drinks, erythritol has long been considered a safe alternative to sugar.

But research suggests this widely used sweetener may be quietly undermining one of the body’s most crucial protective barriers – with potentially serious consequences for heart health and stroke risk.

A study from the University of Colorado suggests erythritol may damage cells in the blood-brain barrier, the brain’s security system that keeps out harmful substances while letting in nutrients.

MIT researchers invent new human brain model to enable disease research, drug discovery

A new 3D human brain tissue platform developed by MIT researchers is the first to integrate all major brain cell types, including neurons, glial cells, and the vasculature, into a single culture.

Grown from individual donors’ induced pluripotent stem cells, these models — dubbed Multicellular Integrated Brains (miBrains) — replicate key features and functions of human brain tissue, are readily customizable through gene editing, and can be produced in quantities that support large-scale research.

Although each unit is smaller than a dime, miBrains may be worth a great deal to researchers and drug developers who need more complex living lab models to better understand brain biology and treat diseases.

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