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Google helps map one cubic millimeter of human brain tissue

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This sample tissue was anonymously donated from patients that have undergone surgery to treat epilepsy at the Massachusetts General Hospital in Boston (MGH). It was then given to researchers at Harvard’s Lichtman laboratory.

The Harvard researchers cut the tissue into ~5300 individual 30 nanometer sections using an automated tape collecting ultra-microtome, mounted those sections onto silicon wafers, and then imaged the brain tissue at 4 nm resolution in a customized 61-beam parallelized scanning electron microscope for rapid image acquisition.

The end result was 225 million individual 2D images that Google then computationally stitched and aligned into a 3D volume with thousands of Google Cloud TPUs were leveraged in the process. This human brain map is now accessible through Google’s web-based Neuroglancer visualization tool.

Star Wars — Youth Biology PSA

Creepio advocates for the technological singularity
 as foretold by the PROPHECY! 😉

Happy memorial day to the other Americans amongst you!


Creepio helps us get ready for Ep. 3 with a brief science lesson. Why wait, when you can learn?
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Puberty, it’s happening to you and me.

New tool activates deep brain neurons

Using a mouse model, Chen and the team delivered a viral construct containing TRPV1 ion channels to genetically-selected neurons. Then, they delivered small burst of heat via low-intensity focused ultrasound to the select neurons in the brain via a wearable device. The heat, only a few degrees warmer than body temperature, activated the TRPV1 ion channel, which acted as a switch to turn the neurons on or off.


Neurological disorders such as Parkinson’s disease and epilepsy have had some treatment success with deep brain stimulation, but those require surgical device implantation. A multidisciplinary team at Washington University in St. Louis has developed a new brain stimulation technique using focused ultrasound that is able to turn specific types of neurons in the brain on and off and precisely control motor activity without surgical device implantation.

The team, led by Hong Chen, assistant professor of biomedical engineering in the McKelvey School of Engineering and of radiation oncology at the School of Medicine, is the first to provide direct evidence showing noninvasive, cell-type-specific activation of neurons in the brain of mammal by combining ultrasound-induced heating effect and genetics, which they have named sonothermogenetics. It is also the first work to show that the ultrasound-genetics combination can robustly control behavior by stimulating a specific target deep in the brain.

Results of the three years of research, which was funded in part by the National Institutes of Health’s BRAIN Initiative, were published online in Brain Stimulation May 11, 2021.

Same difference: Two halves of the hippocampus have different gene activity

A study of gene activity in the brain’s hippocampus, led by UT Southwestern researchers, has identified marked differences between the region’s anterior and posterior portions. The findings, published today in Neuron, could shed light on a variety of brain disorders that involve the hippocampus and may eventually help lead to new, targeted treatments.

“These new data reveal molecular-level differences that allow us to view the anterior and posterior hippocampus in a whole new way,” says study leader Genevieve Konopka, Ph.D., associate professor of neuroscience at UTSW.

She and study co-leader Bradley C. Lega, M.D., associate professor of neurological surgery, neurology, and psychiatry, explain that the human hippocampus is typically considered a uniform structure with key roles in memory, spatial navigation, and regulation of emotions. However, some research has suggested that the two ends of the hippocampus—the anterior, which points downward toward the face, and the posterior, which points upward toward the back of the head—take on different jobs.

Changes in How Cholesterol Breaks Down in the Body May Accelerate Progression of Dementia

Summary: Disruptions in how the body converts cholesterol into bile acids may play a key role in the development of dementia.

Source: PLOS

The blood-brain barrier is impermeable to cholesterol, yet high blood cholesterol is associated with increased risk of Alzheimer’s disease and vascular dementia. However, the underlying mechanisms mediating this relationship are poorly understood.

Scientists Trace The Intricate Oscillations Our Brains Use to ‘Save’ Memories in Sleep

There’s already a strong link between sleep and memory, and scientists have just found out more about how that relationship works: there are specific patterns of brain activity that open up windows on our past experiences, fixing them in our long-term memory.

These patterns involve the slow oscillations (SOs) of brain waves that normally accompany sleep, and the sharper sleep spindle bursts of activity that happen during dreamless slumber. It now seems that the precise way these two types of brain activity coordinate with each other makes a big difference in how well we remember something.

Our memories are essentially being reactivated during sleep via these two brain activity patterns, the researchers suggest, making us more likely to remember them. The stronger the reactivation, the more likely we are to be able to recall a memory later on.

Greg Fahy, Intervene Immune | Thymus Rejuvenation Progress Update

More on thymus regeneration. Unless I understood wrong one patient’s epigenetic clock went from his mid 50’s to early 40’s.


Foresight Biotech & Health Extension Meeting sponsored by 100 Plus Capital.

2021 program & apply to join: https://foresight.org/biotech-health-extension-program/

Greg Fahy, Intervene Immune.
Thymus Rejuvenation Progress Update.

- Designed and led the TRIIM trial; Published the first report of thymus regeneration in a normal human; Granted patents on methods for and applications of human thymus regeneration.

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