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Category: genetics – Page 563

Chemical reaction lights the way for tracking microRNA in living organisms

The ability to track molecular events inside the cells of living organisms offers a powerful window into fundamental biological processes, but methods for visualizing RNA in vivo without interfering with cell processes have been elusive. Now, researchers have developed a light-induced chemical reaction that accomplishes this feat in live zebrafish embryos (ACS Cent. Sci. 2016, DOI: 10.1021/acscentsci.6b00054). It is the first technique for detecting specific strings of nucleic acids in live vertebrates that doesn’t require genetically modifying the organism. What’s more, it’s sensitive enough to visualize the expression of microRNAs, small noncoding RNAs that act as puppetmasters of gene expression.

To do the reaction, chemical biologist Nicolas Winssinger, biochemist Marcos Gonzalez-Gaitan, and their colleagues at the University of Geneva designed two nucleic acid probes that each complement and bind to adjacent halves of a target microRNA sequence. The researchers conjugated one probe to a ruthenium complex that absorbs visible light and the other to a fluorogenic rhodamine that lights up when its azide bonds are cleaved. When the probes attach to the target sequence, the two reagents come close enough to react. Shining a light on the sample activates the ruthenium which then reduces the azide in the rhodamine conjugate, releasing its fluorescence. The dependence on external light allows researchers to control when the reporting reaction happens, Winssinger explains.

The team first developed the system three years ago (Chem. 2013, DOI: 10.1002/chem.201300060) for use in cultured cells; here, they adapted it for use in just-fertilized zebrafish embryos. “That’s really not trivial,” says Winssinger. The probes had to be nontoxic, stable for a day or more, and powerful enough to work even after being diluted through cell division.

Sources of longevity genes for genetic engineering

There are various animals that can live for centuries or millenia.

Genetic engineering technology is rapidly improving and genome wide genetic engineering could become a reality within 10–20 years. It could be possible to replicate in humans the longevity genes and cancer immunity in certain animals.

The longest lived mammal is the bowhead whales. Some confirmed sources estimate bowhead whales to have lived at least to 211 years of age.

Copper is key in burning fat: Scientist says results could provide new target for obesity research

Interesting concept; my only concern is to individuals with nuero diseases or prone through genetics to have neuro diseases. For Dystonia patients/ victims who have copper compounds in their systems can potentially develop a form of secondary dystonia which can be terminal. Also, my years in the labs at ORNL taught us a lot about heavy metal exposures (including copper compounds); so I am a bit taken back by this article.

A new study is further burnishing copper’s reputation as an essential nutrient for human physiology. A research team led by a scientist at the Department of Energy’s Lawrence Berkeley National Laboratory (Berkeley Lab) and at the University of California, Berkeley, has found that copper plays a key role in metabolizing fat.

Long prized as a malleable, conductive metal used in cookware, electronics, jewelry and plumbing, has been gaining increasing attention over the past decade for its role in certain biological functions. It has been known that copper is needed to form red blood cells, absorb iron, develop connective tissue and support the immune system.

The new findings, to appear in the July print issue of Nature Chemical Biology but published online today, establishes for the first time copper’s role in .

We can now ‘cut and paste’ RNA in addition to DNA, and it could disable viruses

You’ve probably heard of CRISPR — the gene editing tool that essentially lets scientists cut and paste DNA, removing things like HIV and muscular dystrophy from our cells — and now scientists have discovered a way to edit RNA with just as much precision.

RNA is DNA’s close biological cousin, responsible for translating messages from the nucleus to the rest of the cell, and being able to change it could open up all-new disease-fighting possibilities.

Just like CRISPR/Cas9 editing, the new procedure selectively cuts up RNA, which gives us microscopic control over genetic information, and the researchers behind it say it could open up the method could be used to block viruses and halt disease in its tracks.

Scientists to launch 10-year project for creating human genomes

Hmmmm;

Today a group of 25 scientists officially announced their plan to build a human genome from scratch within the next 10 years. The proposal — called the Human Genome Project-Write — would be, as BuzzFeed News put it, to lay “DNA letters like bricks”.

The group also includes experts from Harvard Medical School, the Massachusetts Institute of Technology, the USA government’s Lawrence Berkeley National Laboratory, Johns Hopkins University School of Medicine, Yale University, the University of Edinburgh, Columbia University, the University of California at Berkeley, the University of Washington, Autodesk Bio/Nano Research Group, Bioeconomy Capital and other institutions, and is led by geneticist Jef Boeke of the New York University Langone Medical Center.

The project is expected to be enormously controversial.

The Next Genetics Moonshot: Building a Human Genome from Scratch

Yes, it’s true that a group of leading geneticists is calling for the construction of a synthetic human genome. That means they want to take 3 billion chemical building blocks and assemble them into one complete package of DNA, encoding all the body parts and life processes that make up a functional human being.”

“But the organizers want to make one thing very clear: ‘We’re not planning to make synthetic people,’ says a somewhat exasperated Jef Boeke, one of the champions of this proposal. ‘We never were.’

The Human Genome Project-Write could bring down the cost of DNA manufacturing.

Fully synthetic humans? Proposed project could make it a reality

A group of scientists on Thursday proposed an ambitious project to create a synthetic human genome, or genetic blueprint, in an endeavour that is bound to raise concerns over the extent to which human life can or should be engineered.

The project, which arose from a meeting of scientists last month at Harvard University, aims to build such a synthetic genome and test it in cells in the laboratory within 10 years. The project was unveiled in the journal Science by the experts involved.

Scientists trick body’s viral response to combat cancer

German researchers on Wednesday presented a Trojan horse method of attacking cancer, sneaking virus impersonators into the human body to unleash an anti-tumour immune offensive.

Tested in only three people so far, the treatment claims to be the latest advance in immunotherapy, which aims to rouse the body’s own immune army against disease.

Made in the lab, this Trojan horse is composed of nanoparticles containing RNA—a form of genetic coding—enclosed by a fatty acid membrane.

Ageing breakthrough: Scientists create “hyper-long” telomeres without gene editing

Scientists have successfully created mice with significantly longer telomeres than normal, resulting in a drop in molecular ageing, without using genetic manipulation.

Telomeres, which are found at the end of all animals’ chromosomes, are thought to be vital to ending ageing, as their shortening as we age is a key factor in cellular ageing and the onset of age-related disease. However, when they are lengthened beyond normal levels in mice, they have the precise opposite effect, protecting against ageing and related diseases, and increasing lifespan.

The mice, which are chimeras carrying both regular and “hyper-long” telomeres, were created using a technique based on epigenic changes, where embryonic stem cells are expanded in vitro, prompting changes to telomeres.

Scientists create mice with hyper-long telomeres without altering the genes

The cells with hyper-long telomeres in these mice appear to be perfectly functional. When the tissues were analysed at various moments (0, 1, 6 and 12 months of life), these cells maintained the additional length scale (they shortened over time but at a normal rhythm), accumulated less DNA damage and had a greater capacity to repair any damage. In addition, the animals presented a lower tumour incidence than normal mice.

These results show that pluripotent stem cells that carry hyper-long telomeres can give rise to organisms with telomeres that remain young at the molecular level for longer. According to the authors, this “proof of concept means that it is possible to generate adult tissue with longer telomeres in the absence of genetic modifications”.

The Telomeres and Telomerase Group at the Spanish National Cancer Research Centre (CNIO), in collaboration with the Centre’s Transgenic Mice Core Unit, has succeeded in creating mice in the laboratory with hyper-long telomeres and with reduced molecular ageing, avoiding the use of what to date has been the standard method: genetic manipulation. This new technique based on epigenetic changes that is described today in the pages of Nature Communications, avoids the manipulation of genes in order to delay molecular ageing. The study also underlines the importance of this new strategy in generating embryonic stem cells and iPS cells with long telomeres for use in regenerative medicine.

Telomeres (the protective structures located at the ends of chromosomes) are essential to the stability of our genetic material and to maintain the “youthful state” of our and of our bodies. However, get shorter as we age. Once they reach a critical length, cells enter a state of senescence or die. This is one of the molecular causes of cellular ageing and of the emergence of ageing-related diseases.

On the other hand, when telomeres are extra-long — as achieved for the first time by the CNIO group headed by Maria A. Blasco using the expression of the telomerase gene — they exert a protective role against ageing and ageing-related diseases, thus significantly extending the lives of the mice.

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