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High-Risk, High-Payoff Bio-Research For National Security Challenges — Dr. David A. Markowitz, Ph.D., IARPA


Dr. David A. Markowitz, Ph.D. (https://www.markowitz.bio/) is a Program Manager at the Intelligence Advanced Research Projects Activity (IARPA — https://www.iarpa.gov/) which is an organization that invests in high-risk, high-payoff research programs to tackle some of the most difficult challenges of the agencies and disciplines in the U.S. Intelligence Community (IC).

IARPA’s mission is to push the boundaries of science to develop solutions that empower the U.S. IC to do its work better and more efficiently for national security. IARPA does not have an operational mission and does not deploy technologies directly to the field, but instead, they facilitate the transition of research results to IC customers for operational application.

Currently, Dr. Markowitz leads three research programs at the intersection between biology, engineering, and computing. These programs are: FELIX, which is revolutionizing the field of bio-surveillance with new experimental and computational tools for detecting genetic engineering in complex biological samples; MIST, which is developing compact and inexpensive DNA data storage devices to address rapidly growing enterprise storage needs; and MICrONS, which is guiding the development of next-generation machine learning algorithms by reverse-engineering the computations performed by mammalian neocortex.

Previously, as a researcher in neuroscience, Dr. Markowitz published first-author papers on neural computation, the neural circuit basis of cognition in primates, and neural decoding strategies for brain-machine interfaces.

Where does the mind end and the world begin? Is the mind locked inside its skull, sealed in with skin, or does it expand outward, merging with things and places and other minds that it thinks with? What if there are objects outside—a pen and paper, a phone—that serve the same function as parts of the brain, enabling it to calculate or remember?

In their famous 1998 paper “The Extended Mind,” philosophers Andy Clark and David J. Chalmers posed those questions and answered them provocatively: cognitive processes “ain’t all in the head.” The environment has an active role in driving cognition; cognition is sometimes made up of neural, bodily, and environmental processes.

From where he started in cognitive science in the early nineteen-eighties, taking an interest in A.I., professor Clark has moved quite far. “I was very much on the machine-functionalism side back in those days,” he says. “I thought that mind and intelligence were quite high-level abstract achievements where having the right low-level structures in place didn’t really matter.”

Each step he took, from symbolic A.I. to connectionism, from connectionism to embodied cognition, and now to predictive processing, took Clark farther away from the idea of cognition as a disembodied language and toward thinking of it as fundamentally shaped by the particular structure of its animal body, with its arms and its legs and its neuronal brain. He had come far enough that he had now to confront a question: If cognition was a deeply animal business, then how far could artificial intelligence go?

Clark knew that the roboticist Rodney Brooks had recently begun to question a core assumption of the whole A.I. project: that minds could be built of machines. Brooks speculated that one of the reasons A.I. systems and robots appeared to hit a ceiling at a certain level of complexity was that they were built of the wrong stuff—that maybe the fact that robots were not flesh made more of a difference than he’d realized.

Clark couldn’t decide what he thought about this. On the one hand, he was no longer a machine functionalist, exactly: he no longer believed that the mind was just a kind of software that could run on hardware of various sorts. On the other hand, he didn’t believe, and didn’t want to believe, that a mind could be constructed only out of soft biological tissue. He was too committed to the idea of the extended mind—to the prospect of brain-machine combinations, to the glorious cyborg future—to give it up. In a way, though, the structure of the brain itself had some of the qualities that attracted him to the extended-mind view in the first place: it was not one indivisible thing but millions of quasi-independent things, which worked seamlessly together while each had a kind of existence of its own.

Summary: A new study will investigate the genetic and biological mysteries of extreme longevity and healthy aging.

Source: american federation for aging research.

Decades of research will be aided by the results of a study launched today – the most ambitious ever conducted to uncover and understand the genetic and biological mysteries of exceptional longevity and healthy aging.

Ancient bacteria might be sleeping beneath the surface of Mars, where it has been shielded from the harsh radiation of space for millions of years, according to new research.

While no evidence of life has been found on the red planet, researchers simulated conditions on Mars in a lab to see how bacteria and fungi could survive. The scientists were surprised to discover that bacteria could likely survive for 280 million years if it was buried and protected from the ionizing radiation and solar particles that bombard the Martian surface.

The findings suggested that if life ever existed on Mars, the dormant evidence of it might still be located in the planet’s subsurface — a place that future missions could explore as they drill into Martian soil.

Synthetic biology offers a way to engineer cells to perform novel functions, such as glowing with fluorescent light when they detect a certain chemical. Usually, this is done by altering cells so they express genes that can be triggered by a certain input.

However, there is often a long lag time between an event such as detecting a molecule and the resulting output, because of the time required for to transcribe and translate the necessary genes. MIT synthetic biologists have now developed an alternative approach to designing such , which relies exclusively on fast, reversible protein-protein interactions. This means that there’s no waiting for genes to be transcribed or translated into proteins, so circuits can be turned on much faster—within seconds.

“We now have a methodology for designing protein interactions that occur at a very fast timescale, which no one has been able to develop systematically. We’re getting to the point of being able to engineer any function at timescales of a few seconds or less,” says Deepak Mishra, a research associate in MIT’s Department of Biological Engineering and the lead author of the new study.

Imagine a robot that could find human beings after a natural disaster because it has a mosquito’s ability to sense human sweat. Shoji Takeuchi of the University of Tokyo has already made a robotic finger that includes living tissue – here he explores possible applications of combining biological material with artificial materials in robotic systems.

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