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Category: biotech/medical – Page 1,260

How did life begin? Abiogenesis. Origin of life from nonliving matter

Sponsored by Kishore Tipirneni’s new book “A New Eden” available here: https://getbook.at/NewEden | Abiogenesis – origin of life. Living matter from non-living matter. The origin of living organisms from inorganic or non-living material is called abiogenesis. But abiogenesis is not evolution.

Despite the incredible variations of life we see today, at the fundamental level, all living things contain three elements: Nucleic acids, Proteins, and lipids. These three things had to have been present in order for life to start.

The most important component may have been lipids which make up the cell walls because without a way to encapsulate certain elements, they various chemicals could not come together to potentially interact.

Lipids molecules have a unique structure. The round part loves water. The tail part hates water. So it has a tendency to self-assemble into natural spheres. However, when there are certain salt ions present, it destroys the lipid spheres. But RNA and other functions of a cell require salts and other ions. However, researchers at the University of Washington showed that lipid spheres do not disassemble if they are in the presence of amino acids, precursor to protein molecules. So it turns out that lipid cell walls and proteins need each other to exist, in salty water.

Today, genetic information is stored in DNA. RNA is created from DNA. The simplicity of RNA compared to its cousin DNA, is the reason that most scientists think DNA came from RNA. This is part of the RNA world” HYPOTHESIS, which theorizes that RNA was the essential precursor which led to the first living matter. But how did the first RNA molecule form from non-living chemicals? This is not clear cut, so here are some theories. RNA is made of three chemical components: the sugar ribose, the bases and phosphate. Figuring out how the bond between the bases and ribose first formed has been a difficult to replicate in the lab because cells in our body require complex enzymes to bring RNA building blocks together before they combine to form polymers. In a 2009 study, researchers at Rensselaer Polytechnic Institute showed that RNA could have formed on the surface of clays which act like catalysts to bring RNA bases together.

But how did proteins form? In the 1950s, several experiments by Stanley Miller and Harold Urey verified that the natural formation of amino acids, components of proteins, was possible under the atmospheric conditions of Primordial Earth. It turns out that it’s pretty easy to form many kinds of organic molecules, in a wide range of environments.

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Fasting triggers stem cell regeneration of damaged, old immune system

Fasting database:

Recreates the immune system;…Prolonged fasting forces the body to use stores of glucose, fat and ketones, but it also breaks down a significant portion of white blood cells. Longo likens the effect to lightening a plane of excess cargo. During each cycle of fasting, this depletion of white blood cells induces changes that trigger stem cell-based regeneration of new immune system cells. In particular, prolonged fasting reduced the enzyme PKA, an effect previously discovered by the Longo team to extend longevity in simple organisms and which has been linked in other research to the regulation of stem cell self-renewal and pluripotency — that is, the potential for one cell to develop into many different cell types. Prolonged fasting also lowered levels of IGF-1, a growth-factor hormone that Longo and others have linked to aging, tumor progression and cancer risk.

Recreates the immune system (page loads slow)

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Results in mice are first evidence of natural intervention triggering stem cell-dependent regeneration of organ or system.

Human-powered aircraft: A plane with ‘impossible engineering’ and no engine

Lazarus, built by university students, made its longest flight time yet.

Students at the University of Southampton have a special project they have been working on for years together. That is, to power flight using only the muscle power of a single pilot, technically known as human-powered aircraft (HPA). Earlier this year, the team won their first Formula Flight competition with their design dubbed Lazarus.

Formula Flight is a competition organized by the Royal Aeronautical Society’s Human Powered Flight Group. According to its webpage, human-powered flying is a sport that combines “extreme athleticism with almost impossible engineering”.

Southampton University.

Since the human body can only produce maximum power for a few seconds, the aircraft used in the sport needs to have a low cruise speed and lightweight construction. This allows them to fly only in low winds and achieving flight can be rather hard though not impossible.

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A novel technique to predict volcanic eruptions now possible, thanks to magma ‘foams’

A seven-year study reveals that variations in specific isotopes linked to magmatic ‘foams’ can be used to predict volcanic unrest.

Scientists have found a way to use the ratio of atoms in specific gases created by volcanic fumaroles (gaps in the Earth’s surface) to detect what’s happening to magma deep below.

Volcanic eruptions are dangerous and challenging to predict. Could the new findings change this?

Marco Ritzki/iStock.

Much like obtaining a blood test to examine your health, the new method, published in Nature by a team at the University of Tokyo, could indicate when things are “heating up.” Significantly, it could aid in the prediction of future volcanic eruptions.

‘Primordial super-enhancers’ provide early snapshot of the mechanisms that allowed for multicellularity

New research at the University of Chicago has found that the same machinery used by mammalian cells to drive cellular differentiation also plays a critical role in activating genes in yeast in response to environmental stress.

The results, which were published in Molecular Cell, suggest that these machines, known as transcriptional condensates, are an ancient, conserved tool used by to promote high level for over a billion years. The findings are helping to not only better explain how cells respond dynamically to environmental cues but also have implications for understanding human diseases such as cancer and neurodegeneration.

The study extends existing research on transcriptional condensates in into yeast and their heat shock response—how cells respond to high temperatures. “The heat shock response is ancient,” said David Pincus, Ph.D., Assistant Professor of Molecular Genetics and Cell Biology at UChicago. “This response existed long before there were people—long before there were even yeast. It predates the split between prokaryotes and eukaryotes, so it’s a really fundamental and important cellular response.”

Powerhouses of the Cells: Mitochondria have a Waste Disposal Mechanism to get rid of Mutated mtDNA

A research team has identified a molecular target that could open up new therapeutic options to treat aging-associated diseases like Parkinson’s. Scientists at the University of Cologne have discovered how cells can eliminate mutated mitochondrial DNA (mtDNA). Mitochondria are the powerhouses of our cells. Due to their evolutionary descent from bacteria, they still have genetic material packaged in chromosome-like structures (nucleoids). They convert the chemical energy in our food into a biologically usable form. A team of researchers from the University of Cologne’s Physiology Centre at the Faculty of Medicine, the Centre for Molecular Medicine Cologne (CMMC) and the CECAD Cluster of Excellence for Aging Research has now shown that mutations of the mtDNA lead to a local rearrangement of proteins in the mitochondrial membrane. The mutated mtDNA is targeted, eliminated, and subjected to autophagy, the cellular ‘waste disposal’. The results have appeared in Nature Communications under the title ‘Mitochondrial membrane proteins and VPS35 orchestrate selective removal of mtDNA’.

In many tissues, mutations in mtDNA accumulate as a result of normal aging. These kinds of mutations are an important cause of many aging-associated diseases. There are thousands of copies mtDNA in every cell, so mitochondrial function is only impaired when the percentage of mutated mtDNA molecules exceeds a certain threshold value. It has long been established that mitochondrial damage, including acute mtDNA damage, triggers the process of mitophagy. In this process, dysfunctional mitochondrial parts are selectively degraded and recycled.

Dr David Pla-Martin, the lead author of the current study, explained the details: ‘What is new in our study is that this mechanism does not affect the cells’ endowment with mitochondria, but only clears out the damaged mtDNA. By labelling neighbouring proteins — so-called proximity labelling — we showed that mtDNA damage leads to the recruitment of endosomes in close proximity to nucleoids.’ Their removal is coordinated by the interaction of the nucleoid protein Twinkle and the mitochondrial membrane proteins SAMM50 and ATAD3 controls their distribution, SAMM50 induces the release and transfer of the nucleoid to the so-called endosomes. ‘This additionally prevents the activation of an immune response. The protein VPS35, the main component of the retromer, mediates the maturation of early endosomes into late autophagy vesicles, where degradation and recycling ultimately take place,’ said Pla-Martin.

Lethal cancer cells buddy up to survive

Tumor cells in the most common pancreatic cancer share nutrients to live and grow. A new discovery by University of California, Irvine biologists and collaborators during a four-year investigation could help lead to better treatments for pancreatic ductal adenocarcinoma, which accounts for over 90 percent of pancreatic cancer cases. The scientists’ paper appears in Nature Cancer. While pancreatic cancer is relatively rare, it is among the leading causes of cancer death in the United States.

One obstacle in treating , known as PDA, is that it generally does not show early symptoms. Another hurdle is the complexity of its dense and fibrous tumors. Consequently, they do not have fully functioning in the tumor. On one front, this makes it difficult to deliver effective chemotherapy. However, it also means the tumors have developed a different kind of metabolism.

“Without blood vessels, PDA cells aren’t getting the normal nutrients they need, so they have come up with other ways to nourish themselves and grow,” said Christopher Halbrook, assistant professor of molecular biology & biochemistry, and lead and co-corresponding author. Understanding this process is essential for devising treatments targeting the cancer’s metabolism.

Scientists Discover a New Way To Make Species

The evolution of a new species by hybridization of two previously described species with no change in chromosomal number is very unusual in the animal world. So far, only a few empirically acknowledged cases of this spontaneous mode of evolution (from one generation to the next) known as homoploid hybridization exist.

A study led by Axel Meyer, Professor of Zoology and Evolutionary Biology at the University of Konstanz, has successfully demonstrated the emergence of a new hybrid species in cichlid fishes. This is likely the first instance of this genetic speciation method in vertebrates. The researchers reveal that a new hybrid species has emerged from the cichlid A. sagittae and A. xiloaensis in the crater lake Xiloá in Nicaragua using whole genome sequencing of more than 120 individuals as well as a number of other techniques.

Their findings were recently published in the journal Nature Communications.