Researchers from A*STAR Genome Institute of Singapore (A*STAR GIS) have developed a new method to study individual RNA molecules and reveal how their structures influence gene regulation, a fundamental process that affects how cells function in health and disease. Their work was published in Nature Methods.

RNA is best known for carrying genetic instructions from DNA to make proteins. However, RNA does more than act as a messenger. Like a string that can bend, fold and interact with other molecules, RNA can adopt different shapes that affect how it behaves in the cell. These shapes can influence how efficiently proteins are produced, how long RNA molecules last, and how diseases such as viral infections progress.

Until now, studying these structures in detail has been difficult because RNA is highly flexible and dynamic. Most existing methods only provide an average picture across many RNA molecules, making it harder to see how individual RNA molecules may fold differently, even when they come from the same gene.