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Aug 16, 2022

Brain Abnormalities in Epilepsy Detected by New AI Algorithm

Posted by in categories: biotech/medical, information science, robotics/AI

An artificial intelligence (AI) algorithm to detect subtle brain abnormalities that cause epileptic seizures has been developed. The abnormalities, known as focal cortical dysplasias (FCDs), can often be treated with surgery but are difficult to visualize on an MRI. The new algorithm is expected to give physicians greater confidence in identifying FCDs in patients with epilepsy.

The work, which was part of the Multicentre Epilepsy Lesion Detection (MELD) project, appeared in Brain Interpretable surface-based detection of focal cortical dysplasias: a Multi-centre Epilepsy Lesion Detection study.” Konrad Wagstyl, PhD, and Sophie Adler, PhD, both from University College London, led an international team of researchers on the work.

To develop the algorithm, the team quantified features of the brain cortex—such as thickness and folding—in more than 1,000 patient MRI scans from 22 epilepsy centers around the world. They then trained the algorithm on examples labeled by expert radiologists as either being healthy or having FCD.

Aug 16, 2022

Nuclear morphology is a deep learning biomarker of cellular senescence

Posted by in categories: biotech/medical, life extension, robotics/AI

To evaluate the accuracy of the models28, we sampled from the BNN or deep ensemble to determine their uncertainty predictions (Extended Data Fig. 3a, b). Correct predictions are oriented toward the lower and higher range of the output, representing greater certainty about samples’ states, whereas incorrect predictions tend towards the 0.5 threshold. We can therefore assume higher confidence in a model’s predictions by removing the predictions in the middle using thresholds. We evaluated a range of thresholds with several models (Extended Data Fig. 3c–f), which show a substantial increase in accuracy due to the ambiguous samples being discarded, including the ensemble of normalized models reaching accuracy of 97.2%. A similar approach was applied to other models, including the IR and RS models (Extended Data Fig. 3g, h), raising accuracy by 10–15%, although this reduces the number of cells considered.

To better understand the development of the senescent phenotype and how nuclear morphology changes over time, we analyzed human fibroblasts induced to senescence by 10 Gy IR and imaged at days 10, 17, 24 and 31. The predictor identifies senescence at all four times points with probability that increases from days 10 to 17 but declines by day 31 (Extended Data Fig. 4a). Interestingly, examining the probability distribution of the predictor it was apparent that a growing peak of nonsenescent cells appear after day 17, suggesting that a small number of cells were able to escape senescence induction and eventually overgrow the senescent cells (Extended Data Fig. 4b). Indeed, when investigating markers of proliferation, we see that over the time course, PCNA declines until day 17, after which the expression starts to return (Extended Data Fig. 4c). p21Cip1 follows an inverse pattern with stain intensity increasing initially and then declining slightly by day 31 (Extended Data Fig. 4D). We also saw a decrease in DAPI intensity for days 10 and 17, indicating senescence, but a reversion to control level by day 31 (Extended Data Fig. 4e). To confirm that the predictor accurately determined senescence even 31 days after IR, we evaluated if markers of proliferation and senescence correlated with predicted senescence. Accordingly, cells with predicted senescence had higher p21Cip1 levels, lower PCNA and lower DAPI intensities and vice versa (Extended Data Fig. 4f–h). Morphologically, area and aspect are higher for predicted senescence, whereas convexity is lower (Extended Data Fig. 4i–k). Finally, a simple nuclei count confirms growth, following IR treatment (Extended Data Fig. 4l). Overall, the senescence predictor captures the state during development in agreement with multiple markers and morphological signs.

Senescent cells are associated with the appearance of persistent nuclear foci of the DNA damage markers γH2AX and 53BP1 (refs. 31,32). Our base data set including control, RS and IR lines were examined for damage foci using high-content microscopy, where we found the mean count for controls to be below 1 for each marker, whereas RS had 4.0 γH2AX and 2.0 53BP1 foci and IR had 3.4 γH2AX and 3.0 53BP1 foci (Fig. 4a, b and Extended Data Fig. 5a). We calculated the Pearson correlation between predicted senescence and γH2AX and 53BP1 foci counts and found that across all conditions, there is a moderately strong correlation of around 0.5 (Fig. 4c). This association is also visible when simply plotting foci counts and senescence prediction, which shows predicted senescence flipping from low to high, along with shifts in foci counts (Extended Data Fig. 5b). Our feature reduction masked internal nuclear structure, but it is nonetheless notable that senescence prediction correlates with foci count. We also compared the correlation between predicted senescence and area, where we see a correlation of around 0.5. In sum, there is a considerable correlation between foci counts and senescence.

Aug 16, 2022

ADHD and Neurodegenerative Disease Risk: A Critical Examination of the Evidence

Posted by in categories: biotech/medical, health, neuroscience

In this review, we undertake a critical appraisal of eight published studies providing first evidence that a history of attention-deficit/hyperactivity disorder (ADHD) may increase risk for the later-life development of a neurodegenerative disease, in particular Lewy body diseases (LBD), by up to five-fold. Most of these studies have used data linked to health records in large population registers and include impressive sample sizes and adequate follow-up periods. We identify a number of methodological limitations as well, including potential diagnostic inaccuracies arising from the use of electronic health records, biases in the measurement of ADHD status and symptoms, and concerns surrounding the representativeness of ADHD and LBD cohorts. Consequently, previously reported risk associations may have been underestimated due to the high likelihood of potentially missed ADHD cases in groups used as “controls”, or alternatively previous estimates may be inflated due to the inclusion of confounding comorbidities or non-ADHD cases within “exposed” groups that may have better accounted for dementia risk. Prospective longitudinal studies involving well-characterized cases and controls are recommended to provide some reassurance about the validity of neurodegenerative risk estimates in ADHD.

Attention-deficit hyperactivity disorder (ADHD) is a psychiatric disorder beginning in childhood that is characterized by core symptoms of inattention, impulsivity, and hyperactivity (Biederman and Faraone, 2005; American Psychiatric Association, 2013; Faraone et al., 2015). Diagnostic criteria require symptoms to present in early childhood, before age 12, and cause impairment in daily activities in more than one setting (e.g., home, school, social environment, and/or interpersonal relationships; American Psychiatric Association, 2013). Although it is largely considered a childhood disorder, 40–60% of cases of ADHD persist into adulthood (Culpepper and Mattingly, 2010; Michielsen et al., 2012; Volkow and Swanson, 2013; Asherson et al., 2016), and the overall prevalence of adult ADHD ranges from 2 to 4% (Kieling and Rohde, 2012; Fayyad et al., 2017).

ADHD may persist into later life as well. Roughly 3% of adults over age 50 suffer from significant symptoms of attention-deficit/hyperactivity disorder (ADHD; Michielsen et al., 2012; Kooij et al., 2016), often presenting as executive dysfunction (e.g., absent-mindedness) and memory impairments (e.g., forgetfulness or difficulty learning new things; Rosler et al., 2010; Thorell et al., 2017; Callahan et al., 2021). These symptoms overlap with those of early neurodegenerative disease (Ivanchak et al., 2012; Pollack, 2012; Goodman et al., 2016; Callahan et al., 2017), and it is currently unclear whether ADHD is associated with an increased neurodegenerative risk, or if it is being misdiagnosed due to symptom overlap (Callahan et al., 2017). Clarifying this issue is crucial to reduce dementia misdiagnoses, and to guide treatment, which will differ depending on whether the disease course is assumed to be neurodegenerative or not.

Aug 16, 2022

Synapses as a model: Solid-state memory in neuromorphic circuits

Posted by in categories: biological, chemistry, computing, neuroscience

Certain tasks—such as recognizing patterns and language—are performed highly efficiently by a human brain, requiring only about one ten-thousandth of the energy of a conventional, so-called “von Neumann” computer. One of the reasons lies in the structural differences: In a von Neumann architecture, there is a clear separation between memory and processor, which requires constant moving of large amounts of data. This is time-and energy-consuming—the so-called von Neumann bottleneck. In the brain, the computational operation takes place directly in the data memory and the biological synapses perform the tasks of memory and processor at the same time.

In Forschungszentrum Jülich, scientists have been working for more than 15 years on special data storage devices and components that can have similar properties to the synapses in the human brain. So-called memristive memory devices, also known as , are considered to be extremely fast and energy-saving, and can be miniaturized very well down to the nanometer range. The functioning of memristive cells is based on a very special effect: Their electrical resistance is not constant, but can be changed and reset again by applying an external voltage, theoretically continuously. The change in resistance is controlled by the movement of oxygen ions. If these move out of the semiconducting metal oxide layer, the material becomes more conductive and the electrical resistance drops. This change in resistance can be used to store information.

The processes that can occur in cells are complex and vary depending on the material system. Three researchers from the Jülich Peter Grünberg Institute—Prof. Regina Dittmann, Dr. Stephan Menzel, and Prof. Rainer Waser—have therefore compiled their research results in a detailed review article, “Nanoionic memristive phenomena in metal oxides: the valence change mechanism.” They explain in detail the various physical and chemical effects in memristors and shed light on the influence of these effects on the switching properties of memristive cells and their reliability.

Aug 16, 2022

Time may be running out for anti-aging biotech AgeX as funds dry up

Posted by in categories: biotech/medical, finance, life extension

AgeX Therapeutics, a preclinical biotech looking to turn back the clock on aging, may have to wind down, announcing “substantial doubt” about its ability to continue as money runs dry and debts mount.

The California biotech made $12,000 in revenue for the second quarter and recorded $1.6 million in operating expenses over the same period, according to financial results posted August 12.

During the first quarter, the biotech borrowed the final half million of credit available under a 2020 agreement with Juvenescence—a separate anti-aging biotech—and entered a new deal in which Juvenescence will provide $13.2 million in credit for a year. AgeX drew an initial $8.2 million of the line of credit and used $7.2 million to refinance the principal and the loan origination fees under a 2019 loan agreement with Juvenescence.

Aug 16, 2022

Critical Research Under Way Benefiting Humans on and off Earth

Posted by in categories: biotech/medical, education, food

The seven Expedition 67 residents kicked off a busy week of critical research benefitting humans living on and off the Earth. The orbital residents also continued supporting the International Space Station’s vast array of flight, research, and life support systems.

Astronauts Bob Hines of NASA and Samantha Cristoforetti of ESA (European Space Agency) took turns on Monday cleaning hardware and supporting samples for a biology study that is exploring skin healing in space. Observations may provide insights improving wound healing therapies for astronauts and Earthlings. Hines then spent the afternoon installing seed cartridges and root modules for the XROOTS space agriculture investigation to begin a 30-day growth period of radishes and mizuna greens. The research uses hydroponics and aeroponics techniques to learn how to produce crops on a larger scale on future missions to the Moon, Mars, and beyond.

NASA Flight Engineer Kjell Lindgren opened up the Kibo laboratory module’s airlock and retrieved an external science platform and installed a small satellite deployer on the research gear. The deployer will be placed outside Kibo in the vacuum of space before deploying a set of CubeSats into low-Earth orbit for a variety of research and education programs.

Aug 16, 2022

New wind sensor uses smart materials to improve drone performance

Posted by in categories: drones, robotics/AI

Engineers have designed and successfully tested a more efficient wind sensor for use on drones, balloons and other autonomous aircraft.

These wind sensors—called anemometers—are used to monitor and direction. As demand for increases, better wind sensors are needed to make it easier for these vehicles to both sense weather changes and perform safer take-offs and landings, according to researchers.

Such enhancements could improve how people use their local airspace, whether it be through drones delivering packages or passengers one day flying on unmanned aircraft, said Marcelo Dapino, co-author of the study and a professor in mechanical and aerospace engineering at The Ohio State University.

Aug 16, 2022

Understanding why zinc-based fuel systems fail

Posted by in categories: chemistry, sustainability

While scientists have hoped that rechargeable zinc-manganese dioxide batteries could be developed into a viable alternative for grid storage applications, engineers at the University of Illinois Chicago and their colleagues identified the reasons these zinc-based fuel systems fail.

The scientists reached this conclusion after leveraging advanced , electrochemical experiments and theoretical calculations to look closer at how the zinc anode works with the manganese cathode in the .

Their findings are reported today in Nature Sustainability.

Aug 16, 2022

Location key to improved autonomous vehicle vision

Posted by in categories: robotics/AI, transportation

QUT robotics researchers working with Ford Motor Company have found a way to tell an autonomous vehicle which cameras to use when navigating.

Professor Michael Milford, Joint Director of the QUT Center for Robotics and Australian Research Council Laureate Fellow and senior author, said the research comes from a project looking at how cameras and LIDAR sensors, commonly used in , can better understand the world around them.

“The key idea here is to learn which cameras to use at different locations in the world, based on previous experience at that location,” Professor Milford said.

Aug 16, 2022

Biology, Botany Research on Station Promoting Healthy Humans

Posted by in categories: biotech/medical, futurism

Understanding how microgravity affects humans and plants is key to supporting not only astronauts on long-term space missions but also improving life on Earth. The Expedition 67 crew explored those very subjects today while also working on U.S. cargo activities and checking Russian spacewalking gear aboard the International Space Station.

NASA Flight Engineers Kjell Lindgren and Bob Hines worked a pair of different experiments on Tuesday with benefits for humans living on and off the Earth. Lindgren processed samples and explored how the immune system ages in microgravity to learn how to keep astronauts healthy on long term missions and treat immunity conditions on Earth. The two-time station visitor conducted the unique research operations using the Life Science Glovebox located in the Kibo laboratory module.

Hines replaced life support components inside the Plant Habitat, a space botany research device helping NASA and its international partners learn how to sustain crews on future missions to the Moon, Mars, and beyond. He worked in the Harmony module swapping carbon dioxide bottles and filters inside the Plant Habitat ensuring ongoing commercial and fundamental plant experiments in weightlessness.