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Jan 17, 2024

Supernova Study Shows Dark Energy May Be More Complicated Than We Thought

Posted by in categories: cosmology, quantum physics

Finally, after more than a decade of work and studying around 1,500 Type Ia supernovas, the Dark Energy Survey has produced a new best measurement of w. We found w = −0.80 ± 0.18, so it’s somewhere between −0.62 and −0.98.

This is a very interesting result. It is close to −1, but not quite exactly there. To be the cosmological constant, or the energy of empty space, it would need to be exactly −1.

Where does this leave us? With the idea that a more complex model of dark energy may be needed, perhaps one in which this mysterious energy has changed over the life of the universe.

Jan 17, 2024

Waymo’s Driverless Cars Are Hitting the Highway Sans Safety Drivers in Arizona

Posted by in categories: business, robotics/AI, sustainability, transportation

To back up the decision, Waymo pointed to its safety record and history building and operating self-driving trucks on highways. (The company shuttered its self-driving truck project last year to focus on taxis.) Including highways should also decrease route times for riders—especially from the airport—with some rides taking half the time.

Although highways are simpler to navigate than city streets—where cars contend with twists, turns, signs, stoplights, pedestrians, and pets—the stakes are higher. A crash at 10 or 20 miles per hour is less likely to cause major injury than one at highway speeds. And while it’s relatively straightforward (if less than ideal) for a malfunctioning robotaxi to stop or pull to the side of the road and await human help in the city, such tactics won’t do on the highway, where it’s dangerous for cars to suddenly slow or stop.

Continue reading “Waymo’s Driverless Cars Are Hitting the Highway Sans Safety Drivers in Arizona” »

Jan 17, 2024

This Graphene-Based Brain Implant Can Peer Deep Into the Brain From Its Surface

Posted by in categories: biotech/medical, neuroscience

Finding ways to reduce the invasiveness of brain implants could greatly expand their potential applications. A new device tested in mice that sits on the brain’s surface—but can still read activity deep within—could lead to safer and more effective ways to read neural activity.

There are already a variety of technologies that allow us to peer into the inner workings of the brain, but they all come with limitations. Minimally invasive approaches include functional MRI, where an MRI scanner is used to image changes of blood flow in the brain, and EEG, where electrodes placed on the scalp are used to pick up the brain’s electrical signals.

The former requires the patient to sit in an MRI machine though, and the latter is too imprecise for most applications. The gold standard approach involves inserting electrodes deep into brain tissue to obtain the highest quality readouts. But this requires a risky surgical procedure, and scarring and the inevitable shifting of the electrodes can lead to the signal degrading over time.

Jan 17, 2024

Amazing Robot Controlled By Rat Brain Continues Progress

Posted by in categories: biological, cyborgs, robotics/AI

Some technologies are so cool they make you do a double take. Case in point: robots being controlled by rat brains. Kevin Warwick, once a cyborg and still a researcher in cybernetics at the University of Reading, has been working on creating neural networks that can control machines. He and his team have taken the brain cells from rats, cultured them, and used them as the guidance control circuit for simple wheeled robots. Electrical impulses from the bot enter the batch of neurons, and responses from the cells are turned into commands for the device. The cells can form new connections, making the system a true learning machine. Warwick hasn’t released any new videos of the rat brain robot for the past few years, but the three older clips we have for you below are still awesome. He and his competitors continue to move this technology forward – animal cyborgs are real.

The skills of these rat-robot hybrids are very basic at this point. Mainly the neuron control helps the robot to avoid walls. Yet that obstacle avoidance often shows clear improvement over time, demonstrating how networks of neurons can grant simple learning to the machines. Whenever I watch the robots in the videos below I have to do a quick reality check – these machines are being controlled by biological cells! It’s simply amazing.

Jan 17, 2024

BIDCell: Biologically-informed self-supervised learning for segmentation of subcellular spatial transcriptomics data

Posted by in categories: biotech/medical, robotics/AI

Thirdly, more recent approaches have begun to leverage deep learning (DL) methods. DL models such as U-Net12 have provided solutions for many image analysis challenges. However, they require ground truth to be generated for training. DL-based methods for SST cell segmentation include GeneSegNet13 and SCS14, though supervision is still required in the form of initial cell labels or based on hard-coded rules. Further limitations of existing methods encountered during our benchmarking, such as lengthy code runtimes, are included in Supplementary Table 1. The self-supervised learning (SSL) paradigm can provide a solution to overcome the requirement of annotations. While SSL-based methods have shown promise for other imaging modalities15,16, direct application to SST images remains challenging. SST data are considerably different from other cellular imaging modalities and natural images (e.g., regular RGB images), as they typically contain hundreds of channels, and there is a lack of clear visual cues that indicate cell boundaries. This creates new challenges such as (i) accurately delineating cohesive masks for cells in densely-packed regions, (ii) handling high sparsity within gene channels, and (iii) addressing the lack of contrast for cell instances.

While these morphological and DL-based approaches have shown promise, they have not fully exploited the high-dimensional expression information contained within SST data. It has become increasingly clear that relying solely on imaging information may not be sufficient to accurately segment cells. There is growing interest in leveraging large, well-annotated scRNA-seq datasets17, as exemplified by JSTA18, which proposed a joint cell segmentation and cell type annotation strategy. While much of the literature has emphasised the importance of accounting for biological information such as transcriptional composition, cell type, and cell morphology, the impact of incorporating such information into segmentation approaches remains to be fully understood.

Here, we present a biologically-informed deep learning-based cell segmentation (BIDCell) framework (Fig. 1 a), that addresses the challenges of cell body segmentation in SST images through key innovations in the framework and learning strategies. We introduce (a) biologically-informed loss functions with multiple synergistic components; and (b) explicitly incorporate prior knowledge from single-cell sequencing data to enable the estimation of different cell shapes. The combination of our losses and use of existing scRNA-seq data in supplement to subcellular imaging data improves performance, and BIDCell is generalisable across different SST platforms. Along with the development of our segmentation method, we created a comprehensive evaluation framework for cell segmentation, CellSPA, that assesses five complementary categories of criteria for identifying the optimal segmentation strategies. This framework aims to promote the adoption of new segmentation methods for novel biotechnological data.

Jan 17, 2024

Organic mixed conductors for bioinspired electronics

Posted by in categories: chemistry, electronics

Current technologies of bioinspired and neuromorphic electronics still lack a universal framework for integration into everyday life. This Perspective highlights how bioinspired electronics with soft electrochemical matter based on organic mixed conductors can potentially enable the integration of diverse forms of intelligence everywhere.

Jan 17, 2024

Sam Altman Says Human-Tier AI Is Coming Soon

Posted by in categories: employment, robotics/AI

Human-tier AI will change the world and jobs “much less than we think,” OpenAI CEO Sam Altman said while attending the World Economic Forum.

Jan 17, 2024

29 Million-Year-Old Grasshopper Nest Found Intact With Eggs, Study Says

Posted by in category: futurism

Scientists discovered a fossilized grasshopper egg pod filled with eggs that could be unlike anything paleontologists had ever seen before, according to a new study.

Jan 17, 2024

How to watch Samsung’s Galaxy S24 event

Posted by in categories: mobile phones, robotics/AI

Viewers will find out Samsung’s game plan for Galaxy AI and see the new Galaxy S24 lineup.

Jan 17, 2024

Meet pAblo·pCasso: A new leap in CRISPR technologies for next-gen genome engineering

Posted by in categories: bioengineering, biotech/medical, genetics

A new CRISPR-Cas toolkit, dubbed “pAblo·pCasso,” is set to transform the landscape of bacterial genome editing, offering unprecedented precision and flexibility in genetic engineering. The new technology, developed by researchers at The Novo Nordisk Foundation Center for Biosustainability (DTU Biosustain), expands the range of genome sites available for base-editing and dramatically accelerates the development of bacteria for a wide range of bioproduction applications.

PAblo·pCasso sets a new standard in CRISPR-Cas technologies. A key innovation is to enable precise and reversible DNA edits within Gram-negative bacteria, a feat not achievable with previous CRISPR systems. The toolkit utilizes specialized fusion enzymes, modified Cas9 coupled with editor modules CBE or ABE, which act like molecular pencils to alter specific DNA nucleotides, thus accurately controlling gene function.

The development of pAblo·pCasso involved overcoming significant challenges. Traditional CRISPR-Cas systems were limited by their need for specific DNA sequences (PAM sequences) near the target site and were less effective in making precise, single-nucleotide changes. pAblo·pCasso transcends these limitations by incorporating advanced Cas-fusion variants that do not require specific PAM sequences, thereby expanding the range of possible genomic editing sites.

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